TPDB

3D PDB MODEL

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TPDB ID TPDB44860

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

AI4AVP dbAMP 3.0 DRAVP 2.0 Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 12-aa standard natural antiviral peptide sequence curated from AI4AVP, dbAMP 3.0, DRAVP 2.0, and other sources, with an available 3D structural model.

Sequence

CDVIALLCHLNT

FASTA

>TPDB44860|Antiviral|length=12
CDVIALLCHLNT

Formula C56H95N15O17S2

Absent Amino Acids REQGKMFPSWY

Common Amino Acids L

Mass 1314.58

PI 4.94

Basic Residues 1

Acidic Residues 1

Hydrophobic Residues 6

Net Charge -1

Boman Index 0.18

Hydrophobicity 1.333

Aliphatic Index 162.50

Half Life

Mammalian: 1.2 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 125

Absorbance 280nm 9.51

Polar Residues 4

number

1

A

0

R

1

N

1

D

2

C

0

E

0

Q

0

G

1

H

1

I

3

L

0

K

0

M

0

F

0

P

0

S

1

T

0

W

0

Y

1

V

Amino Acid Distribution

A: 1 R: 0 N: 1 D: 1 C: 2 E: 0 Q: 0 G: 0 H: 1 I: 1 L: 3 K: 0 M: 0 F: 0 P: 0 S: 0 T: 1 W: 0 Y: 0 V: 1

Length

12

Formula

C56H95N15O17S2

Mass

1314.58

PI

4.94

Net Charge

-1

Boman Index

0.18

Hydrophobicity

1.333

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.