TPDB

3D PDB MODEL

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TPDB ID TPDB44857

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

AI4AVP dbAMP 3.0 DRAVP 2.0 Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 25-aa standard natural antiviral peptide sequence curated from AI4AVP, dbAMP 3.0, DRAVP 2.0, and other sources, with an available 3D structural model.

Sequence

CRCCELKSLCPTLMRVVRLLGLVLL

FASTA

>TPDB44857|Antiviral|length=25
CRCCELKSLCPTLMRVVRLLGLVLL

Formula C123H223N35O30S5

Absent Amino Acids ANDQHIFWY

Common Amino Acids L

Mass 2832.64

PI 8.74

Basic Residues 4

Acidic Residues 1

Hydrophobic Residues 12

Net Charge +3

Boman Index 0.71

Hydrophobicity 1.220

Aliphatic Index 159.60

Half Life

Mammalian: 1.2 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 250

Absorbance 280nm 8.83

Polar Residues 6

number

0

A

3

R

0

N

0

D

4

C

1

E

0

Q

1

G

0

H

0

I

8

L

1

K

1

M

0

F

1

P

1

S

1

T

0

W

0

Y

3

V

Amino Acid Distribution

A: 0 R: 3 N: 0 D: 0 C: 4 E: 1 Q: 0 G: 1 H: 0 I: 0 L: 8 K: 1 M: 1 F: 0 P: 1 S: 1 T: 1 W: 0 Y: 0 V: 3

Length

25

Formula

C123H223N35O30S5

Mass

2832.64

PI

8.74

Net Charge

+3

Boman Index

0.71

Hydrophobicity

1.220

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.