TPDB

3D PDB MODEL

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TPDB ID TPDB44832

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

AI4AVP dbAMP 3.0 DRAVP 2.0 Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 25-aa standard natural antiviral peptide sequence curated from AI4AVP, dbAMP 3.0, DRAVP 2.0, and other sources, with an available 3D structural model.

Sequence

CDVIALLCHLNTPSFNTTHYRESWY

FASTA

>TPDB44832|Antiviral|length=25
CDVIALLCHLNTPSFNTTHYRESWY

Formula C134H195N35O39S2

Absent Amino Acids QGKM

Common Amino Acids LT

Mass 2984.35

PI 6.01

Basic Residues 3

Acidic Residues 2

Hydrophobic Residues 10

Net Charge -1

Boman Index 0.52

Hydrophobicity -0.160

Aliphatic Index 78.00

Half Life

Mammalian: 1.2 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 8605

Absorbance 280nm 288.34

Polar Residues 11

number

1

A

1

R

2

N

1

D

2

C

1

E

0

Q

0

G

2

H

1

I

3

L

0

K

0

M

1

F

1

P

2

S

3

T

1

W

2

Y

1

V

Amino Acid Distribution

A: 1 R: 1 N: 2 D: 1 C: 2 E: 1 Q: 0 G: 0 H: 2 I: 1 L: 3 K: 0 M: 0 F: 1 P: 1 S: 2 T: 3 W: 1 Y: 2 V: 1

Length

25

Formula

C134H195N35O39S2

Mass

2984.35

PI

6.01

Net Charge

-1

Boman Index

0.52

Hydrophobicity

-0.160

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.