TPDB

3D PDB MODEL

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TPDB ID TPDB44639

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

AI4AVP dbAMP 3.0 DRAVP 2.0 Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 20-aa standard natural antiviral peptide sequence curated from AI4AVP, dbAMP 3.0, DRAVP 2.0, and other sources, with an available 3D structural model.

Sequence

RGILRNWYNPFAGLRQSLEQ

FASTA

>TPDB44639|Antiviral|length=20
RGILRNWYNPFAGLRQSLEQ

Formula C109H168N34O29

Absent Amino Acids DCHKMTV

Common Amino Acids RL

Mass 2418.74

PI 11.06

Basic Residues 3

Acidic Residues 1

Hydrophobic Residues 8

Net Charge +2

Boman Index 0.97

Hydrophobicity -0.795

Aliphatic Index 83.00

Half Life

Mammalian: 1 hour Yeast: 2 min E.coli: 2 min

Extinction Coefficient Cystines 6990

Absorbance 280nm 288.99

Polar Residues 6

number

1

A

3

R

2

N

0

D

0

C

1

E

2

Q

2

G

0

H

1

I

3

L

0

K

0

M

1

F

1

P

1

S

0

T

1

W

1

Y

0

V

Amino Acid Distribution

A: 1 R: 3 N: 2 D: 0 C: 0 E: 1 Q: 2 G: 2 H: 0 I: 1 L: 3 K: 0 M: 0 F: 1 P: 1 S: 1 T: 0 W: 1 Y: 1 V: 0

Length

20

Formula

C109H168N34O29

Mass

2418.74

PI

11.06

Net Charge

+2

Boman Index

0.97

Hydrophobicity

-0.795

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.