TPDB

3D PDB MODEL

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TPDB ID TPDB44601

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

AI4AVP AVPpred-BWR dbAMP 3.0 DRAVP 2.0 Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 20-aa standard natural antiviral peptide sequence curated from AI4AVP, AVPpred-BWR, dbAMP 3.0, and other sources, with an available 3D structural model.

Sequence

GGKMLYNKVTKQLSYCTDPL

FASTA

>TPDB44601|Antiviral|length=20
GGKMLYNKVTKQLSYCTDPL

Formula C100H163N25O30S2

Absent Amino Acids AREHIFW

Common Amino Acids LK

Mass 2259.66

PI 9.49

Basic Residues 3

Acidic Residues 1

Hydrophobic Residues 7

Net Charge +2

Boman Index 2.12

Hydrophobicity -0.470

Aliphatic Index 73.00

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 2980

Absorbance 280nm 131.88

Polar Residues 8

number

0

A

0

R

1

N

1

D

1

C

0

E

1

Q

2

G

0

H

0

I

3

L

3

K

1

M

0

F

1

P

1

S

2

T

0

W

2

Y

1

V

Amino Acid Distribution

A: 0 R: 0 N: 1 D: 1 C: 1 E: 0 Q: 1 G: 2 H: 0 I: 0 L: 3 K: 3 M: 1 F: 0 P: 1 S: 1 T: 2 W: 0 Y: 2 V: 1

Length

20

Formula

C100H163N25O30S2

Mass

2259.66

PI

9.49

Net Charge

+2

Boman Index

2.12

Hydrophobicity

-0.470

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.