TPDB

3D PDB MODEL

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TPDB ID TPDB44590

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

AI4AVP dbAMP 3.0 DRAVP 2.0 Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 21-aa standard natural antiviral peptide sequence curated from AI4AVP, dbAMP 3.0, DRAVP 2.0, and other sources, with an available 3D structural model.

Sequence

PLSPPLRNTHPQAMQWNSTTF

FASTA

>TPDB44590|Antiviral|length=21
PLSPPLRNTHPQAMQWNSTTF

Formula C108H163N31O31S1

Absent Amino Acids DCEGIKYV

Common Amino Acids P

Mass 2423.73

PI 11.05

Basic Residues 2

Acidic Residues 0

Hydrophobic Residues 6

Net Charge +1

Boman Index 1.75

Hydrophobicity -0.886

Aliphatic Index 41.90

Half Life

Mammalian: >20 hour Yeast: >20 hour E.coli: ?

Extinction Coefficient Cystines 5500

Absorbance 280nm 226.92

Polar Residues 9

number

1

A

1

R

2

N

0

D

0

C

0

E

2

Q

0

G

1

H

0

I

2

L

0

K

1

M

1

F

4

P

2

S

3

T

1

W

0

Y

0

V

Amino Acid Distribution

A: 1 R: 1 N: 2 D: 0 C: 0 E: 0 Q: 2 G: 0 H: 1 I: 0 L: 2 K: 0 M: 1 F: 1 P: 4 S: 2 T: 3 W: 1 Y: 0 V: 0

Length

21

Formula

C108H163N31O31S1

Mass

2423.73

PI

11.05

Net Charge

+1

Boman Index

1.75

Hydrophobicity

-0.886

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.