TPDB

3D PDB MODEL

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TPDB ID TPDB44484

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

AI4AVP dbAMP 3.0 DRAVP 2.0 Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 35-aa standard natural antiviral peptide sequence curated from AI4AVP, dbAMP 3.0, DRAVP 2.0, and other sources, with an available 3D structural model.

Sequence

PDAVYLHRIDLGPPISLERLDVGTNLGNAIAKLED

FASTA

>TPDB44484|Antiviral|length=35
PDAVYLHRIDLGPPISLERLDVGTNLGNAIAKLED

Formula C168H274N46O53

Absent Amino Acids CQMFW

Common Amino Acids L

Mass 3786.30

PI 4.30

Basic Residues 4

Acidic Residues 6

Hydrophobic Residues 15

Net Charge -3

Boman Index 9.42

Hydrophobicity -0.080

Aliphatic Index 125.43

Half Life

Mammalian: >20 hour Yeast: >20 hour E.coli: ?

Extinction Coefficient Cystines 1490

Absorbance 280nm 39.35

Polar Residues 5

number

3

A

2

R

2

N

4

D

0

C

2

E

0

Q

3

G

1

H

3

I

6

L

1

K

0

M

0

F

3

P

1

S

1

T

0

W

1

Y

2

V

Amino Acid Distribution

A: 3 R: 2 N: 2 D: 4 C: 0 E: 2 Q: 0 G: 3 H: 1 I: 3 L: 6 K: 1 M: 0 F: 0 P: 3 S: 1 T: 1 W: 0 Y: 1 V: 2

Length

35

Formula

C168H274N46O53

Mass

3786.30

PI

4.30

Net Charge

-3

Boman Index

9.42

Hydrophobicity

-0.080

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.