TPDB

3D PDB MODEL

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TPDB ID TPDB44443

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

AI4AVP dbAMP 3.0 DRAVP 2.0 Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 35-aa standard natural antiviral peptide sequence curated from AI4AVP, dbAMP 3.0, DRAVP 2.0, and other sources, with an available 3D structural model.

Sequence

ITLNNSVALDPIDISIELNKAKSDLEESKEWIRRS

FASTA

>TPDB44443|Antiviral|length=35
ITLNNSVALDPIDISIELNKAKSDLEESKEWIRRS

Formula C174H290N48O59

Absent Amino Acids CQGHMFY

Common Amino Acids IS

Mass 3998.50

PI 4.50

Basic Residues 5

Acidic Residues 7

Hydrophobic Residues 13

Net Charge -2

Boman Index 12.95

Hydrophobicity -0.497

Aliphatic Index 114.29

Half Life

Mammalian: 20 hour Yeast: 30 min E.coli: >10 hour

Extinction Coefficient Cystines 5500

Absorbance 280nm 137.55

Polar Residues 9

number

2

A

2

R

3

N

3

D

0

C

4

E

0

Q

0

G

0

H

5

I

4

L

3

K

0

M

0

F

1

P

5

S

1

T

1

W

0

Y

1

V

Amino Acid Distribution

A: 2 R: 2 N: 3 D: 3 C: 0 E: 4 Q: 0 G: 0 H: 0 I: 5 L: 4 K: 3 M: 0 F: 0 P: 1 S: 5 T: 1 W: 1 Y: 0 V: 1

Length

35

Formula

C174H290N48O59

Mass

3998.50

PI

4.50

Net Charge

-2

Boman Index

12.95

Hydrophobicity

-0.497

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.