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Peptide record

TPDB44399

Antiviral standard
22 amino acids
Basic Information
3D PDB MODEL
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TPDB44399
Antiviral
Anti-infective peptides
AI4AVP AVPpred-BWR dbAMP 3.0 Peptipedia
standard
No
A 22-aa standard-residue antiviral peptide sequence curated from AI4AVP, AVPpred-BWR, dbAMP 3.0, and other sources, with an available 3D structural model.
Sequence
FLDSKAELEKARKILSEVGRWY
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C121H192N32O34
NCQHMPT
ELK
2639.05
9.58
5
4
10
+1
2.23
-0.564
93.18
Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min
6990
2.65
3
Residue Composition
number
2
A
2
R
0
N
1
D
0
C
3
E
0
Q
1
G
0
H
1
I
3
L
3
K
0
M
1
F
0
P
2
S
0
T
1
W
1
Y
1
V
Amino Acid Distribution
A: 2 R: 2 N: 0 D: 1 C: 0 E: 3 Q: 0 G: 1 H: 0 I: 1 L: 3 K: 3 M: 0 F: 1 P: 0 S: 2 T: 0 W: 1 Y: 1 V: 1
Chemical Descriptors
22 reviewed residue count
C121H192N32O34 sequence-only estimate (linear, free termini)
2639.05 sequence-only estimate (linear, free termini)
9.58 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
2.23 sequence-only estimate (linear, free termini)
-0.564 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP 3.0

Other

Source Activity Label Source Definition
Antiviral
dbAMP 3.0 classified under the Anti-viral function class.