TPDB

3D PDB MODEL

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TPDB ID TPDB44379

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

AI4AVP dbAMP 3.0 DRAVP 2.0 Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 35-aa standard natural antiviral peptide sequence curated from AI4AVP, dbAMP 3.0, DRAVP 2.0, and other sources, with an available 3D structural model.

Sequence

DITLNNSVALDPIDISIELNKAKSDLEESKEWIRR

FASTA

>TPDB44379|Antiviral|length=35
DITLNNSVALDPIDISIELNKAKSDLEESKEWIRR

Formula C175H290N48O60

Absent Amino Acids CQGHMFY

Common Amino Acids I

Mass 4026.51

PI 4.29

Basic Residues 5

Acidic Residues 8

Hydrophobic Residues 13

Net Charge -3

Boman Index 14.05

Hydrophobicity -0.574

Aliphatic Index 114.29

Half Life

Mammalian: 1.1 hour Yeast: 3 min E.coli: >10 hour

Extinction Coefficient Cystines 5500

Absorbance 280nm 136.59

Polar Residues 8

number

2

A

2

R

3

N

4

D

0

C

4

E

0

Q

0

G

0

H

5

I

4

L

3

K

0

M

0

F

1

P

4

S

1

T

1

W

0

Y

1

V

Amino Acid Distribution

A: 2 R: 2 N: 3 D: 4 C: 0 E: 4 Q: 0 G: 0 H: 0 I: 5 L: 4 K: 3 M: 0 F: 0 P: 1 S: 4 T: 1 W: 1 Y: 0 V: 1

Length

35

Formula

C175H290N48O60

Mass

4026.51

PI

4.29

Net Charge

-3

Boman Index

14.05

Hydrophobicity

-0.574

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.