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Peptide record

TPDB44335

Antiviral standard
38 amino acids
Basic Information
3D PDB MODEL
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TPDB44335
Antiviral
Anti-infective peptides
AI4AVP AVPpred-BWR DRAVP 2.0 Peptipedia
standard
No
A 38-aa standard-residue antiviral peptide sequence curated from AI4AVP, AVPpred-BWR, DRAVP 2.0, and other sources, with an available 3D structural model.
Sequence
YGRKKRRQRRRGSGIEPHDWTKNITDKIDQIIHDFVDK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C203H329N69O58
ACLM
R
4664.27
10.73
13
6
9
+5
4.39
-1.634
58.95
Mammalian: 2.8 hour Yeast: 10 min E.coli: 2 min
6990
1.50
7
Residue Composition
number
0
A
6
R
1
N
5
D
0
C
1
E
2
Q
3
G
2
H
5
I
0
L
5
K
0
M
1
F
1
P
1
S
2
T
1
W
1
Y
1
V
Amino Acid Distribution
A: 0 R: 6 N: 1 D: 5 C: 0 E: 1 Q: 2 G: 3 H: 2 I: 5 L: 0 K: 5 M: 0 F: 1 P: 1 S: 1 T: 2 W: 1 Y: 1 V: 1
Chemical Descriptors
38 reviewed residue count
C203H329N69O58 sequence-only estimate (linear, free termini)
4664.27 sequence-only estimate (linear, free termini)
10.73 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
4.39 sequence-only estimate (linear, free termini)
-1.634 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

DRAVP 2.0