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Peptide record

TPDB44265

Antiviral standard
20 amino acids
Basic Information
3D PDB MODEL
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TPDB44265
Antiviral
Anti-infective peptides
AI4AVP dbAMP 3.0 DRAVP 2.0 Peptipedia
standard
No
A 20-aa standard-residue antiviral peptide sequence curated from AI4AVP, dbAMP 3.0, DRAVP 2.0, and other sources, with an available 3D structural model.
Sequence
PGGETARKDKFLHMVLPRRL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C103H173N33O26S1
NCQISWY
RL
2321.77
11.37
6
2
7
+3
2.54
-0.705
78.00
Mammalian: >20 hour Yeast: >20 hour E.coli: ?
0
0.00
1
Residue Composition
number
1
A
3
R
0
N
1
D
0
C
1
E
0
Q
2
G
1
H
0
I
3
L
2
K
1
M
1
F
2
P
0
S
1
T
0
W
0
Y
1
V
Amino Acid Distribution
A: 1 R: 3 N: 0 D: 1 C: 0 E: 1 Q: 0 G: 2 H: 1 I: 0 L: 3 K: 2 M: 1 F: 1 P: 2 S: 0 T: 1 W: 0 Y: 0 V: 1
Chemical Descriptors
20 reviewed residue count
C103H173N33O26S1 sequence-only estimate (linear, free termini)
2321.77 sequence-only estimate (linear, free termini)
11.37 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
2.54 sequence-only estimate (linear, free termini)
-0.705 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP 3.0 DRAVP 2.0

Other

Source Activity Label Source Definition
Antiviral
dbAMP 3.0 classified under the Anti-viral function class.