TPDB

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.

TPDB ID TPDB44229

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

AI4AVP dbAMP 3.0 DRAVP 2.0 Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 14-aa standard natural antiviral peptide sequence curated from AI4AVP, dbAMP 3.0, DRAVP 2.0, and other sources, with an available 3D structural model.

Sequence

EDCSTPSSGSFLDR

FASTA

>TPDB44229|Antiviral|length=14
EDCSTPSSGSFLDR

Formula C60H93N17O26S1

Absent Amino Acids ANQHIKMWYV

Common Amino Acids S

Mass 1500.56

PI 3.70

Basic Residues 1

Acidic Residues 3

Hydrophobic Residues 2

Net Charge -2

Boman Index 4.48

Hydrophobicity -0.843

Aliphatic Index 27.86

Half Life

Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour

Extinction Coefficient Cystines 0

Absorbance 280nm 0.00

Polar Residues 6

number

0

A

1

R

0

N

2

D

1

C

1

E

0

Q

1

G

0

H

0

I

1

L

0

K

0

M

1

F

1

P

4

S

1

T

0

W

0

Y

0

V

Amino Acid Distribution

A: 0 R: 1 N: 0 D: 2 C: 1 E: 1 Q: 0 G: 1 H: 0 I: 0 L: 1 K: 0 M: 0 F: 1 P: 1 S: 4 T: 1 W: 0 Y: 0 V: 0

Length

14

Formula

C60H93N17O26S1

Mass

1500.56

PI

3.70

Net Charge

-2

Boman Index

4.48

Hydrophobicity

-0.843

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.