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Peptide record

TPDB44066

Antiviral standard
20 amino acids
Basic Information
3D PDB MODEL
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TPDB44066
Antiviral
Anti-infective peptides
AI4AVP AVPpred-BWR dbAMP 3.0 Peptipedia
standard
No
A 20-aa standard-residue antiviral peptide sequence curated from AI4AVP, AVPpred-BWR, dbAMP 3.0, and other sources, with an available 3D structural model.
Sequence
VSVIVPDYQCYLDRVDTWLQ
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C110H166N26O33S1
ANEGHKMF
V
2412.74
3.59
1
3
10
-2
1.19
0.140
116.50
Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour
8480
3.51
7
Residue Composition
number
0
A
1
R
0
N
3
D
1
C
0
E
2
Q
0
G
0
H
1
I
2
L
0
K
0
M
0
F
1
P
1
S
1
T
1
W
2
Y
4
V
Amino Acid Distribution
A: 0 R: 1 N: 0 D: 3 C: 1 E: 0 Q: 2 G: 0 H: 0 I: 1 L: 2 K: 0 M: 0 F: 0 P: 1 S: 1 T: 1 W: 1 Y: 2 V: 4
Chemical Descriptors
20 reviewed residue count
C110H166N26O33S1 sequence-only estimate (linear, free termini)
2412.74 sequence-only estimate (linear, free termini)
3.59 sequence-only estimate (linear, free termini)
-2 sequence-only estimate (linear, free termini)
1.19 sequence-only estimate (linear, free termini)
0.140 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP 3.0

Other

Source Activity Label Source Definition
Antiviral
dbAMP 3.0 classified under the Anti-viral function class.