TPDB

3D PDB MODEL

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TPDB ID TPDB44066

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

AI4AVP AVPpred-BWR dbAMP 3.0 Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 20-aa standard natural antiviral peptide sequence curated from AI4AVP, AVPpred-BWR, dbAMP 3.0, and other sources, with an available 3D structural model.

Sequence

VSVIVPDYQCYLDRVDTWLQ

FASTA

>TPDB44066|Antiviral|length=20
VSVIVPDYQCYLDRVDTWLQ

Formula C110H166N26O33S1

Absent Amino Acids ANEGHKMF

Common Amino Acids V

Mass 2412.74

PI 3.59

Basic Residues 1

Acidic Residues 3

Hydrophobic Residues 10

Net Charge -2

Boman Index 1.26

Hydrophobicity 0.140

Aliphatic Index 116.50

Half Life

Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 8480

Absorbance 280nm 351.47

Polar Residues 7

number

0

A

1

R

0

N

3

D

1

C

0

E

2

Q

0

G

0

H

1

I

2

L

0

K

0

M

0

F

1

P

1

S

1

T

1

W

2

Y

4

V

Amino Acid Distribution

A: 0 R: 1 N: 0 D: 3 C: 1 E: 0 Q: 2 G: 0 H: 0 I: 1 L: 2 K: 0 M: 0 F: 0 P: 1 S: 1 T: 1 W: 1 Y: 2 V: 4

Length

20

Formula

C110H166N26O33S1

Mass

2412.74

PI

3.59

Net Charge

-2

Boman Index

1.26

Hydrophobicity

0.140

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.