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Peptide record

TPDB44054

Antiviral standard
35 amino acids
Basic Information
3D PDB MODEL
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TPDB44054
Antiviral
Anti-infective peptides
AI4AVP dbAMP 3.0 DRAVP 2.0 Peptipedia
standard
No
A 35-aa standard-residue antiviral peptide sequence curated from AI4AVP, dbAMP 3.0, DRAVP 2.0, and other sources, with an available 3D structural model.
Sequence
YLHRIDLGPPISLERLDVGTNLGNAIAKLEDAKEL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C171H283N47O53
CQMFW
L
3845.41
4.76
5
6
15
-2
1.43
-0.157
128.29
Mammalian: 2.8 hour Yeast: 10 min E.coli: 2 min
1490
0.39
5
Residue Composition
number
3
A
2
R
2
N
3
D
0
C
3
E
0
Q
3
G
1
H
3
I
7
L
2
K
0
M
0
F
2
P
1
S
1
T
0
W
1
Y
1
V
Amino Acid Distribution
A: 3 R: 2 N: 2 D: 3 C: 0 E: 3 Q: 0 G: 3 H: 1 I: 3 L: 7 K: 2 M: 0 F: 0 P: 2 S: 1 T: 1 W: 0 Y: 1 V: 1
Chemical Descriptors
35 reviewed residue count
C171H283N47O53 sequence-only estimate (linear, free termini)
3845.41 sequence-only estimate (linear, free termini)
4.76 sequence-only estimate (linear, free termini)
-2 sequence-only estimate (linear, free termini)
1.43 sequence-only estimate (linear, free termini)
-0.157 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP 3.0 DRAVP 2.0

Other

Source Activity Label Source Definition
Antiviral
dbAMP 3.0 classified under the Anti-viral function class.