TPDB

3D PDB MODEL

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TPDB ID TPDB44022

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

AI4AVP AVPpred-BWR dbAMP 3.0 Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 26-aa standard natural antiviral peptide sequence curated from AI4AVP, AVPpred-BWR, dbAMP 3.0, and other sources, with an available 3D structural model.

Sequence

SISCSRGLVCLLPRLTNESGNDRFDS

FASTA

>TPDB44022|Antiviral|length=26
SISCSRGLVCLLPRLTNESGNDRFDS

Formula C117H195N37O41S2

Absent Amino Acids AQHKMWY

Common Amino Acids S

Mass 2840.18

PI 6.27

Basic Residues 3

Acidic Residues 3

Hydrophobic Residues 7

Net Charge -0

Boman Index 4.92

Hydrophobicity -0.246

Aliphatic Index 86.15

Half Life

Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 125

Absorbance 280nm 4.40

Polar Residues 10

number

0

A

3

R

2

N

2

D

2

C

1

E

0

Q

2

G

0

H

1

I

4

L

0

K

0

M

1

F

1

P

5

S

1

T

0

W

0

Y

1

V

Amino Acid Distribution

A: 0 R: 3 N: 2 D: 2 C: 2 E: 1 Q: 0 G: 2 H: 0 I: 1 L: 4 K: 0 M: 0 F: 1 P: 1 S: 5 T: 1 W: 0 Y: 0 V: 1

Length

26

Formula

C117H195N37O41S2

Mass

2840.18

PI

6.27

Net Charge

-0

Boman Index

4.92

Hydrophobicity

-0.246

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.