TPDB

3D PDB MODEL

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TPDB ID TPDB43987

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

AI4AVP dbAMP 3.0 DRAVP 2.0 Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 35-aa standard natural antiviral peptide sequence curated from AI4AVP, dbAMP 3.0, DRAVP 2.0, and other sources, with an available 3D structural model.

Sequence

AVYLHRIDLGPPISLERLDVGTNLQNAIAKLEDAK

FASTA

>TPDB43987|Antiviral|length=35
AVYLHRIDLGPPISLERLDVGTNLQNAIAKLEDAK

Formula C171H284N48O52

Absent Amino Acids CMFW

Common Amino Acids L

Mass 3844.43

PI 5.42

Basic Residues 5

Acidic Residues 5

Hydrophobic Residues 16

Net Charge -1

Boman Index 9.13

Hydrophobicity -0.083

Aliphatic Index 128.29

Half Life

Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 1490

Absorbance 280nm 38.76

Polar Residues 6

number

4

A

2

R

2

N

3

D

0

C

2

E

1

Q

2

G

1

H

3

I

6

L

2

K

0

M

0

F

2

P

1

S

1

T

0

W

1

Y

2

V

Amino Acid Distribution

A: 4 R: 2 N: 2 D: 3 C: 0 E: 2 Q: 1 G: 2 H: 1 I: 3 L: 6 K: 2 M: 0 F: 0 P: 2 S: 1 T: 1 W: 0 Y: 1 V: 2

Length

35

Formula

C171H284N48O52

Mass

3844.43

PI

5.42

Net Charge

-1

Boman Index

9.13

Hydrophobicity

-0.083

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.