Back to search

Peptide record

TPDB43986

Antiviral standard
45 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB43986
Antiviral
Anti-infective peptides
AI4AVP AVPpred-BWR Peptipedia
standard
No
A 45-aa standard-residue antiviral peptide sequence curated from AI4AVP, AVPpred-BWR, and Peptipedia, with an available 3D structural model.
Sequence
YADHTGLVRDNMAKLRERLKQRQQLFDSQQGWFEGWFNRSPWFTT
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C250H368N74O69S1
CI
RQ
5546.19
10.18
8
5
16
+2
2.99
-1.109
45.56
Mammalian: 2.8 hour Yeast: 10 min E.coli: 2 min
17990
3.24
13
Residue Composition
number
2
A
5
R
2
N
3
D
0
C
2
E
5
Q
3
G
1
H
0
I
4
L
2
K
1
M
4
F
1
P
2
S
3
T
3
W
1
Y
1
V
Amino Acid Distribution
A: 2 R: 5 N: 2 D: 3 C: 0 E: 2 Q: 5 G: 3 H: 1 I: 0 L: 4 K: 2 M: 1 F: 4 P: 1 S: 2 T: 3 W: 3 Y: 1 V: 1
Chemical Descriptors
45 reviewed residue count
C250H368N74O69S1 sequence-only estimate (linear, free termini)
5546.19 sequence-only estimate (linear, free termini)
10.18 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
2.99 sequence-only estimate (linear, free termini)
-1.109 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA