TPDB

3D PDB MODEL

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TPDB ID TPDB43973

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

AI4AVP dbAMP 3.0 Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 30-aa standard natural antiviral peptide sequence curated from AI4AVP, dbAMP 3.0, and Peptipedia, with an available 3D structural model.

Sequence

CRFPNITNSHVPILQERPPLENRVLTGWGL

FASTA

>TPDB43973|Antiviral|length=30
CRFPNITNSHVPILQERPPLENRVLTGWGL

Formula C155H246N46O42S1

Absent Amino Acids ADKMY

Common Amino Acids LP

Mass 3458.00

PI 9.01

Basic Residues 4

Acidic Residues 2

Hydrophobic Residues 10

Net Charge +1

Boman Index 5.56

Hydrophobicity -0.337

Aliphatic Index 97.33

Half Life

Mammalian: 1.2 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 5500

Absorbance 280nm 159.05

Polar Residues 8

number

0

A

3

R

3

N

0

D

1

C

2

E

1

Q

2

G

1

H

2

I

4

L

0

K

0

M

1

F

4

P

1

S

2

T

1

W

0

Y

2

V

Amino Acid Distribution

A: 0 R: 3 N: 3 D: 0 C: 1 E: 2 Q: 1 G: 2 H: 1 I: 2 L: 4 K: 0 M: 0 F: 1 P: 4 S: 1 T: 2 W: 1 Y: 0 V: 2

Length

30

Formula

C155H246N46O42S1

Mass

3458.00

PI

9.01

Net Charge

+1

Boman Index

5.56

Hydrophobicity

-0.337

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.