TPDB

3D PDB MODEL

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TPDB ID TPDB43767

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

AI4AVP dbAMP 3.0 DRAVP 2.0 Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 14-aa standard natural antiviral peptide sequence curated from AI4AVP, dbAMP 3.0, DRAVP 2.0, and other sources, with an available 3D structural model.

Sequence

FDEMEECSQHLPYA

FASTA

>TPDB43767|Antiviral|length=14
FDEMEECSQHLPYA

Formula C73H103N17O26S2

Absent Amino Acids RNGIKTWV

Common Amino Acids E

Mass 1698.84

PI 3.68

Basic Residues 1

Acidic Residues 4

Hydrophobic Residues 5

Net Charge -4

Boman Index 6.14

Hydrophobicity -0.829

Aliphatic Index 35.00

Half Life

Mammalian: 1.1 hour Yeast: 3 min E.coli: 2 min

Extinction Coefficient Cystines 1490

Absorbance 280nm 87.71

Polar Residues 4

number

1

A

0

R

0

N

1

D

1

C

3

E

1

Q

0

G

1

H

0

I

1

L

0

K

1

M

1

F

1

P

1

S

0

T

0

W

1

Y

0

V

Amino Acid Distribution

A: 1 R: 0 N: 0 D: 1 C: 1 E: 3 Q: 1 G: 0 H: 1 I: 0 L: 1 K: 0 M: 1 F: 1 P: 1 S: 1 T: 0 W: 0 Y: 1 V: 0

Length

14

Formula

C73H103N17O26S2

Mass

1698.84

PI

3.68

Net Charge

-4

Boman Index

6.14

Hydrophobicity

-0.829

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.