TPDB

3D PDB MODEL

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TPDB ID TPDB43739

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

AI4AVP dbAMP 3.0 DRAVP 2.0 Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 20-aa standard natural antiviral peptide sequence curated from AI4AVP, dbAMP 3.0, DRAVP 2.0, and other sources, with an available 3D structural model.

Sequence

PVDCTMYSNKMYNCSLQNGF

FASTA

>TPDB43739|Antiviral|length=20
PVDCTMYSNKMYNCSLQNGF

Formula C98H147N25O32S4

Absent Amino Acids AREHIW

Common Amino Acids N

Mass 2315.63

PI 5.94

Basic Residues 1

Acidic Residues 1

Hydrophobic Residues 7

Net Charge -0

Boman Index 0.48

Hydrophobicity -0.435

Aliphatic Index 34.00

Half Life

Mammalian: >20 hour Yeast: >20 hour E.coli: ?

Extinction Coefficient Cystines 3105

Absorbance 280nm 134.09

Polar Residues 11

number

0

A

0

R

3

N

1

D

2

C

0

E

1

Q

1

G

0

H

0

I

1

L

1

K

2

M

1

F

1

P

2

S

1

T

0

W

2

Y

1

V

Amino Acid Distribution

A: 0 R: 0 N: 3 D: 1 C: 2 E: 0 Q: 1 G: 1 H: 0 I: 0 L: 1 K: 1 M: 2 F: 1 P: 1 S: 2 T: 1 W: 0 Y: 2 V: 1

Length

20

Formula

C98H147N25O32S4

Mass

2315.63

PI

5.94

Net Charge

-0

Boman Index

0.48

Hydrophobicity

-0.435

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.