TPDB

3D PDB MODEL

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TPDB ID TPDB43724

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

AI4AVP dbAMP 3.0 DRAVP 2.0 Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 20-aa standard natural antiviral peptide sequence curated from AI4AVP, dbAMP 3.0, DRAVP 2.0, and other sources, with an available 3D structural model.

Sequence

KQLSYCTDPLQIPLINYTFG

FASTA

>TPDB43724|Antiviral|length=20
KQLSYCTDPLQIPLINYTFG

Formula C107H164N24O31S1

Absent Amino Acids AREHMWV

Common Amino Acids L

Mass 2314.68

PI 6.08

Basic Residues 1

Acidic Residues 1

Hydrophobic Residues 8

Net Charge -0

Boman Index -0.43

Hydrophobicity -0.030

Aliphatic Index 97.50

Half Life

Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min

Extinction Coefficient Cystines 2980

Absorbance 280nm 128.74

Polar Residues 9

number

0

A

0

R

1

N

1

D

1

C

0

E

2

Q

1

G

0

H

2

I

3

L

1

K

0

M

1

F

2

P

1

S

2

T

0

W

2

Y

0

V

Amino Acid Distribution

A: 0 R: 0 N: 1 D: 1 C: 1 E: 0 Q: 2 G: 1 H: 0 I: 2 L: 3 K: 1 M: 0 F: 1 P: 2 S: 1 T: 2 W: 0 Y: 2 V: 0

Length

20

Formula

C107H164N24O31S1

Mass

2314.68

PI

6.08

Net Charge

-0

Boman Index

-0.43

Hydrophobicity

-0.030

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.