Back to search

Peptide record

TPDB43718

Antiviral standard
29 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB43718
Antiviral
Anti-infective peptides
AI4AVP AVPpred-BWR Peptipedia
standard
No
A 29-aa standard-residue antiviral peptide sequence curated from AI4AVP, AVPpred-BWR, and Peptipedia, with an available 3D structural model.
Sequence
PPEPSDLPPGNPVPPPLNYGDPTKLRSPP
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C139H213N35O42
ACQHIMFW
P
3046.43
4.31
2
3
5
-1
1.61
-1.169
50.34
Mammalian: >20 hour Yeast: >20 hour E.coli: ?
1490
0.49
6
Residue Composition
number
0
A
1
R
2
N
2
D
0
C
1
E
0
Q
2
G
0
H
0
I
3
L
1
K
0
M
0
F
12
P
2
S
1
T
0
W
1
Y
1
V
Amino Acid Distribution
A: 0 R: 1 N: 2 D: 2 C: 0 E: 1 Q: 0 G: 2 H: 0 I: 0 L: 3 K: 1 M: 0 F: 0 P: 12 S: 2 T: 1 W: 0 Y: 1 V: 1
Chemical Descriptors
29 reviewed residue count
C139H213N35O42 sequence-only estimate (linear, free termini)
3046.43 sequence-only estimate (linear, free termini)
4.31 sequence-only estimate (linear, free termini)
-1 sequence-only estimate (linear, free termini)
1.61 sequence-only estimate (linear, free termini)
-1.169 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA