TPDB

3D PDB MODEL

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TPDB ID TPDB43699

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

AI4AVP AVPpred-BWR dbAMP 3.0 DRAVP 2.0 Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 22-aa standard natural antiviral peptide sequence curated from AI4AVP, AVPpred-BWR, dbAMP 3.0, and other sources, with an available 3D structural model.

Sequence

PACQDFLGAMIHLKAKTNISIR

FASTA

>TPDB43699|Antiviral|length=22
PACQDFLGAMIHLKAKTNISIR

Formula C107H179N31O29S2

Absent Amino Acids EWYV

Common Amino Acids AI

Mass 2427.91

PI 9.90

Basic Residues 4

Acidic Residues 1

Hydrophobic Residues 10

Net Charge +2

Boman Index 2.55

Hydrophobicity 0.191

Aliphatic Index 102.27

Half Life

Mammalian: >20 hour Yeast: >20 hour E.coli: ?

Extinction Coefficient Cystines 0

Absorbance 280nm 0.00

Polar Residues 5

number

3

A

1

R

1

N

1

D

1

C

0

E

1

Q

1

G

1

H

3

I

2

L

2

K

1

M

1

F

1

P

1

S

1

T

0

W

0

Y

0

V

Amino Acid Distribution

A: 3 R: 1 N: 1 D: 1 C: 1 E: 0 Q: 1 G: 1 H: 1 I: 3 L: 2 K: 2 M: 1 F: 1 P: 1 S: 1 T: 1 W: 0 Y: 0 V: 0

Length

22

Formula

C107H179N31O29S2

Mass

2427.91

PI

9.90

Net Charge

+2

Boman Index

2.55

Hydrophobicity

0.191

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.