TPDB

3D PDB MODEL

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TPDB ID TPDB43600

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

AI4AVP dbAMP 3.0 DRAVP 2.0 Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 20-aa standard natural antiviral peptide sequence curated from AI4AVP, dbAMP 3.0, DRAVP 2.0, and other sources, with an available 3D structural model.

Sequence

MYNCSLQNGFTMKVDDLIVH

FASTA

>TPDB43600|Antiviral|length=20
MYNCSLQNGFTMKVDDLIVH

Formula C101H158N26O31S3

Absent Amino Acids AREPW

Common Amino Acids NDLMV

Mass 2328.70

PI 5.10

Basic Residues 2

Acidic Residues 2

Hydrophobic Residues 9

Net Charge -1

Boman Index 2.05

Hydrophobicity 0.090

Aliphatic Index 87.50

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 1490

Absorbance 280nm 63.98

Polar Residues 7

number

0

A

0

R

2

N

2

D

1

C

0

E

1

Q

1

G

1

H

1

I

2

L

1

K

2

M

1

F

0

P

1

S

1

T

0

W

1

Y

2

V

Amino Acid Distribution

A: 0 R: 0 N: 2 D: 2 C: 1 E: 0 Q: 1 G: 1 H: 1 I: 1 L: 2 K: 1 M: 2 F: 1 P: 0 S: 1 T: 1 W: 0 Y: 1 V: 2

Length

20

Formula

C101H158N26O31S3

Mass

2328.70

PI

5.10

Net Charge

-1

Boman Index

2.05

Hydrophobicity

0.090

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.