TPDB

3D PDB MODEL

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TPDB ID TPDB43588

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

AI4AVP dbAMP 3.0 DRAVP 2.0 Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 23-aa standard natural antiviral peptide sequence curated from AI4AVP, dbAMP 3.0, DRAVP 2.0, and other sources, with an available 3D structural model.

Sequence

KQRNRWEWRPDFKSKKVKISLPC

FASTA

>TPDB43588|Antiviral|length=23
KQRNRWEWRPDFKSKKVKISLPC

Formula C133H213N41O32S1

Absent Amino Acids AGHMTY

Common Amino Acids K

Mass 2930.47

PI 11.06

Basic Residues 8

Acidic Residues 2

Hydrophobic Residues 6

Net Charge +6

Boman Index 6.92

Hydrophobicity -1.557

Aliphatic Index 46.52

Half Life

Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min

Extinction Coefficient Cystines 11000

Absorbance 280nm 375.37

Polar Residues 5

number

0

A

3

R

1

N

1

D

1

C

1

E

1

Q

0

G

0

H

1

I

1

L

5

K

0

M

1

F

2

P

2

S

0

T

2

W

0

Y

1

V

Amino Acid Distribution

A: 0 R: 3 N: 1 D: 1 C: 1 E: 1 Q: 1 G: 0 H: 0 I: 1 L: 1 K: 5 M: 0 F: 1 P: 2 S: 2 T: 0 W: 2 Y: 0 V: 1

Length

23

Formula

C133H213N41O32S1

Mass

2930.47

PI

11.06

Net Charge

+6

Boman Index

6.92

Hydrophobicity

-1.557

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.