TPDB

3D PDB MODEL

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TPDB ID TPDB43436

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

AI4AVP dbAMP 3.0 DRAVP 2.0 Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 20-aa standard natural antiviral peptide sequence curated from AI4AVP, dbAMP 3.0, DRAVP 2.0, and other sources, with an available 3D structural model.

Sequence

RFRIRCRWNVGSDTSLIDTC

FASTA

>TPDB43436|Antiviral|length=20
RFRIRCRWNVGSDTSLIDTC

Formula C101H164N34O30S2

Absent Amino Acids AEQHKMPY

Common Amino Acids R

Mass 2398.74

PI 9.19

Basic Residues 4

Acidic Residues 2

Hydrophobic Residues 6

Net Charge +2

Boman Index 2.10

Hydrophobicity -0.400

Aliphatic Index 73.00

Half Life

Mammalian: 1 hour Yeast: 2 min E.coli: 2 min

Extinction Coefficient Cystines 5625

Absorbance 280nm 234.50

Polar Residues 7

number

0

A

4

R

1

N

2

D

2

C

0

E

0

Q

1

G

0

H

2

I

1

L

0

K

0

M

1

F

0

P

2

S

2

T

1

W

0

Y

1

V

Amino Acid Distribution

A: 0 R: 4 N: 1 D: 2 C: 2 E: 0 Q: 0 G: 1 H: 0 I: 2 L: 1 K: 0 M: 0 F: 1 P: 0 S: 2 T: 2 W: 1 Y: 0 V: 1

Length

20

Formula

C101H164N34O30S2

Mass

2398.74

PI

9.19

Net Charge

+2

Boman Index

2.10

Hydrophobicity

-0.400

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.