TPDB

3D PDB MODEL

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TPDB ID TPDB43383

Activity

Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

AI4AVP dbAMP 3.0 DRAVP 2.0 Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 13-aa standard natural antiviral peptide sequence curated from AI4AVP, dbAMP 3.0, DRAVP 2.0, and other sources, with an available 3D structural model.

Sequence

ACFPWGKEYCGGK

FASTA

>TPDB43383|Antiviral|length=13
ACFPWGKEYCGGK

Formula C66H92N16O17S2

Absent Amino Acids RNDQHILMSTV

Common Amino Acids G

Mass 1445.67

PI 8.27

Basic Residues 2

Acidic Residues 1

Hydrophobic Residues 4

Net Charge +1

Boman Index -0.09

Hydrophobicity -0.515

Aliphatic Index 7.69

Half Life

Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 7115

Absorbance 280nm 492.16

Polar Residues 3

number

1

A

0

R

0

N

0

D

2

C

1

E

0

Q

3

G

0

H

0

I

0

L

2

K

0

M

1

F

1

P

0

S

0

T

1

W

1

Y

0

V

Amino Acid Distribution

A: 1 R: 0 N: 0 D: 0 C: 2 E: 1 Q: 0 G: 3 H: 0 I: 0 L: 0 K: 2 M: 0 F: 1 P: 1 S: 0 T: 0 W: 1 Y: 1 V: 0

Length

13

Formula

C66H92N16O17S2

Mass

1445.67

PI

8.27

Net Charge

+1

Boman Index

-0.09

Hydrophobicity

-0.515

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0

Other

Source Activity Label	Source Definition
Antiviral	dbAMP 3.0 classified under the Anti-viral function class.