Back to search

Peptide record

TPDB43343

Antiviral standard
20 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB43343
Antiviral
Anti-infective peptides
AI4AVP dbAMP 3.0 DRAVP 2.0 Peptipedia
standard
No
A 20-aa standard-residue antiviral peptide sequence curated from AI4AVP, dbAMP 3.0, DRAVP 2.0, and other sources, with an available 3D structural model.
Sequence
GELDELVYLLDGPGYDPIHS
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C100H148N22O34
ARNCQKMFTW
L
2202.40
3.43
1
5
8
-5
0.83
-0.230
112.00
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
2980
1.35
3
Residue Composition
number
0
A
0
R
0
N
3
D
0
C
2
E
0
Q
3
G
1
H
1
I
4
L
0
K
0
M
0
F
2
P
1
S
0
T
0
W
2
Y
1
V
Amino Acid Distribution
A: 0 R: 0 N: 0 D: 3 C: 0 E: 2 Q: 0 G: 3 H: 1 I: 1 L: 4 K: 0 M: 0 F: 0 P: 2 S: 1 T: 0 W: 0 Y: 2 V: 1
Chemical Descriptors
20 reviewed residue count
C100H148N22O34 sequence-only estimate (linear, free termini)
2202.40 sequence-only estimate (linear, free termini)
3.43 sequence-only estimate (linear, free termini)
-5 sequence-only estimate (linear, free termini)
0.83 sequence-only estimate (linear, free termini)
-0.230 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP 3.0 DRAVP 2.0

Other

Source Activity Label Source Definition
Antiviral
dbAMP 3.0 classified under the Anti-viral function class.