TPDB

3D PDB MODEL

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TPDB ID TPDB42426

Activity

Anticancer

Activity_category_statistics

Cancer-related peptides

Database_Source

dbACP

Sequence_Type

standard

Has_Modification No

Description A 26-aa standard natural anticancer peptide sequence curated from dbACP, with an available 3D structural model.

Sequence

MRPEIWIAQSLRRIGDEFNAYYARRV

FASTA

>TPDB42426|Anticancer|length=26
MRPEIWIAQSLRRIGDEFNAYYARRV

Formula C144H224N44O38S1

Absent Amino Acids CHKT

Common Amino Acids R

Mass 3211.69

PI 10.24

Basic Residues 5

Acidic Residues 3

Hydrophobic Residues 13

Net Charge +2

Boman Index 3.89

Hydrophobicity -0.565

Aliphatic Index 82.69

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 8480

Absorbance 280nm 264.04

Polar Residues 5

number

3

A

5

R

1

N

1

D

0

C

2

E

1

Q

1

G

0

H

3

I

1

L

0

K

1

M

1

F

1

P

1

S

0

T

1

W

2

Y

1

V

Amino Acid Distribution

A: 3 R: 5 N: 1 D: 1 C: 0 E: 2 Q: 1 G: 1 H: 0 I: 3 L: 1 K: 0 M: 1 F: 1 P: 1 S: 1 T: 0 W: 1 Y: 2 V: 1

Length

26

Formula

C144H224N44O38S1

Mass

3211.69

PI

10.24

Net Charge

+2

Boman Index

3.89

Hydrophobicity

-0.565

Evidence 1 Activity

Source & Reference

Database Source dbACP