TPDB

TPDB ID TPDB41484

Activity

Anticancer

Activity_category_statistics

Cancer-related peptides

Database_Source

CancerPPD 2.0

Sequence_Type

modified_plain

Has_Modification Yes

Description A 50-aa modified anticancer peptide sequence curated from CancerPPD 2.0, without an available 3D structural model.

Modification

Modified, details unspecified

Sequence

KSCCPNTTGRNIYNTCRFGGGSRQVCASLSGCKIISAST<BR>CPSDYPK

FASTA

>TPDB41484|Anticancer|length=50
KSCCPNTTGRNIYNTCRFGGGSRQVCASLSGCKIISAST<BR>CPSDYPK

Formula C205H336N66O67S6

Absent Amino Acids EHMW

Common Amino Acids S

Mass 4989.68

PI 9.23

Basic Residues 7

Acidic Residues 1

Hydrophobic Residues 10

Net Charge +6

Boman Index 5.94

Hydrophobicity -0.442

Aliphatic Index 41.00

Half Life

Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min

Extinction Coefficient Cystines 3355

Absorbance 280nm 67.24

Polar Residues 23

number

2

A

4

R

3

N

1

D

6

C

0

E

1

Q

5

G

0

H

3

I

1

L

3

K

0

M

1

F

3

P

7

S

4

T

0

W

2

Y

1

V

Amino Acid Distribution

A: 2 R: 4 N: 3 D: 1 C: 6 E: 0 Q: 1 G: 5 H: 0 I: 3 L: 1 K: 3 M: 0 F: 1 P: 3 S: 7 T: 4 W: 0 Y: 2 V: 1

Length

50

Formula

C205H336N66O67S6

Mass

4989.68

PI

9.23

Net Charge

+6

Boman Index

5.94

Hydrophobicity

-0.442

Evidence 1 Activity

Source & Reference

Database Source CancerPPD 2.0

Other

Source Activity Label	Source Definition
Anticancer	CancerPPD 2.0 manually curated experimentally verified anticancer peptide/protein annotation.