TPDB

3D PDB MODEL

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TPDB ID TPDB41291

Activity

Anticancer

Activity_category_statistics

Cancer-related peptides

Database_Source

dbACP

Sequence_Type

modified_plain

Has_Modification Yes

Description A 44-aa modified anticancer peptide sequence curated from dbACP, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

GVDKAGCRYMFGGCSVNDDCCPRLGCHSLFSYCAWDLTFSDOHA

FASTA

>TPDB41291|Anticancer|length=44
GVDKAGCRYMFGGCSVNDDCCPRLGCHSLFSYCAWDLTFSDOHA

Formula C201H292N56O62S7

Absent Amino Acids EQI

Common Amino Acids C

Mass 4709.29

PI 5.14

Basic Residues 5

Acidic Residues 5

Hydrophobic Residues 15

Net Charge -2

Boman Index 1.42

Hydrophobicity -0.018

Aliphatic Index 46.59

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 8855

Absorbance 280nm 188.03

Polar Residues 14

number

3

A

2

R

1

N

5

D

6

C

0

E

0

Q

5

G

2

H

0

I

3

L

1

K

1

M

3

F

1

P

4

S

1

T

1

W

2

Y

2

V

Amino Acid Distribution

A: 3 R: 2 N: 1 D: 5 C: 6 E: 0 Q: 0 G: 5 H: 2 I: 0 L: 3 K: 1 M: 1 F: 3 P: 1 S: 4 T: 1 W: 1 Y: 2 V: 2

Length

44

Formula

C201H292N56O62S7

Mass

4709.29

PI

5.14

Net Charge

-2

Boman Index

1.42

Hydrophobicity

-0.018

Evidence 1 Activity

Source & Reference

Database Source dbACP