TPDB

TPDB ID TPDB41141

Activity

Anticancer

Activity_category_statistics

Cancer-related peptides

Database_Source

CancerPPD 2.0

Sequence_Type

modified_plain

Has_Modification Yes

Description A 88-aa modified anticancer peptide sequence curated from CancerPPD 2.0, without an available 3D structural model.

Modification

Modified, details unspecified

Sequence

GETDPNTQLLNDLGNNMAWGAALGAPGGLGSAALGAAGGALQTVGQ<BR>GLIDHGPVNVFIPVLIGPSWNGSGSGYNSATSSSGSGS

FASTA

>TPDB41141|Anticancer|length=88
GETDPNTQLLNDLGNNMAWGAALGAPGGLGSAALGAAGGALQTVGQ<BR>GLIDHGPVNVFIPVLIGPSWNGSGSGYNSATSSSGSGS

Formula C348H544N102O119S1

Absent Amino Acids CK

Common Amino Acids G

Mass 8092.82

PI 3.96

Basic Residues 2

Acidic Residues 4

Hydrophobic Residues 31

Net Charge -3

Boman Index 3.07

Hydrophobicity 0.011

Aliphatic Index 77.73

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 12490

Absorbance 280nm 154.33

Polar Residues 25

number

10

A

1

R

7

N

3

D

0

C

1

E

3

Q

19

G

1

H

3

I

9

L

0

K

1

M

1

F

5

P

10

S

4

T

2

W

1

Y

4

V

Amino Acid Distribution

A: 10 R: 1 N: 7 D: 3 C: 0 E: 1 Q: 3 G: 19 H: 1 I: 3 L: 9 K: 0 M: 1 F: 1 P: 5 S: 10 T: 4 W: 2 Y: 1 V: 4

Length

88

Formula

C348H544N102O119S1

Mass

8092.82

PI

3.96

Net Charge

-3

Boman Index

3.07

Hydrophobicity

0.011

Evidence 1 Activity

Source & Reference

Database Source CancerPPD 2.0

Other

Source Activity Label	Source Definition
Anticancer	CancerPPD 2.0 manually curated experimentally verified anticancer peptide/protein annotation.