TPDB

3D PDB MODEL

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TPDB ID TPDB40711

Activity

Anticancer

Activity_category_statistics

Cancer-related peptides

Database_Source

Peptipedia dbAMP 3.0

Sequence_Type

standard

Has_Modification No

Description A 29-aa standard natural anticancer peptide sequence curated from Peptipedia and dbAMP 3.0, with an available 3D structural model.

Sequence

CGETCTLGTCYTAGCSCSWPVCTRNGVPI

FASTA

>TPDB40711|Anticancer|length=29
CGETCTLGTCYTAGCSCSWPVCTRNGVPI

Formula C122H192N34O41S6

Absent Amino Acids DQHKMF

Common Amino Acids C

Mass 2983.43

PI 5.90

Basic Residues 1

Acidic Residues 1

Hydrophobic Residues 7

Net Charge -0

Boman Index 0.02

Hydrophobicity 0.341

Aliphatic Index 50.34

Half Life

Mammalian: 1.2 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 7365

Absorbance 280nm 246.86

Polar Residues 15

number

1

A

1

R

1

N

0

D

6

C

1

E

0

Q

4

G

0

H

1

I

1

L

0

K

0

M

0

F

2

P

2

S

5

T

1

W

1

Y

2

V

Amino Acid Distribution

A: 1 R: 1 N: 1 D: 0 C: 6 E: 1 Q: 0 G: 4 H: 0 I: 1 L: 1 K: 0 M: 0 F: 0 P: 2 S: 2 T: 5 W: 1 Y: 1 V: 2

Length

29

Formula

C122H192N34O41S6

Mass

2983.43

PI

5.90

Net Charge

-0

Boman Index

0.02

Hydrophobicity

0.341

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0

Other

Source Activity Label	Source Definition
Anticancer	dbAMP 3.0 classified as Anticancer under the disease-associated peptide function classes.