TPDB

3D PDB MODEL

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TPDB ID TPDB40636

Activity

Anticancer

Activity_category_statistics

Cancer-related peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 16-aa standard natural anticancer peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

AQTQSLVYPFPGPIPK

FASTA

>TPDB40636|Anticancer|length=16
AQTQSLVYPFPGPIPK

Formula C83H127N19O22

Absent Amino Acids RNDCEHMW

Common Amino Acids P

Mass 1743.04

PI 9.74

Basic Residues 1

Acidic Residues 0

Hydrophobic Residues 6

Net Charge +1

Boman Index 1.19

Hydrophobicity -0.213

Aliphatic Index 73.12

Half Life

Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 1490

Absorbance 280nm 85.48

Polar Residues 5

number

1

A

0

R

0

N

0

D

0

C

0

E

2

Q

1

G

0

H

1

I

1

L

1

K

0

M

1

F

4

P

1

S

1

T

0

W

1

Y

1

V

Amino Acid Distribution

A: 1 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 2 G: 1 H: 0 I: 1 L: 1 K: 1 M: 0 F: 1 P: 4 S: 1 T: 1 W: 0 Y: 1 V: 1

Length

16

Formula

C83H127N19O22

Mass

1743.04

PI

9.74

Net Charge

+1

Boman Index

1.19

Hydrophobicity

-0.213

Evidence 1 Activity

Source & Reference

Database Source NA