TPDB

3D PDB MODEL

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TPDB ID TPDB39625

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

ToxinPred 3.0

Sequence_Type

standard

Has_Modification No

Description A 29-aa standard natural toxicity peptide sequence curated from ToxinPred 3.0, with an available 3D structural model.

Sequence

TIIGAPCRKCEHLDRSGNCVRDWSCGQEV

FASTA

>TPDB39625|Toxicity|length=29
TIIGAPCRKCEHLDRSGNCVRDWSCGQEV

Formula C132H214N44O43S4

Absent Amino Acids MFY

Common Amino Acids C

Mass 3233.66

PI 6.85

Basic Residues 5

Acidic Residues 4

Hydrophobic Residues 7

Net Charge -0

Boman Index 8.74

Hydrophobicity -0.503

Aliphatic Index 63.79

Half Life

Mammalian: 7.2 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 5750

Absorbance 280nm 177.82

Polar Residues 9

number

1

A

3

R

1

N

2

D

4

C

2

E

1

Q

3

G

1

H

2

I

1

L

1

K

0

M

0

F

1

P

2

S

1

T

1

W

0

Y

2

V

Amino Acid Distribution

A: 1 R: 3 N: 1 D: 2 C: 4 E: 2 Q: 1 G: 3 H: 1 I: 2 L: 1 K: 1 M: 0 F: 0 P: 1 S: 2 T: 1 W: 1 Y: 0 V: 2

Length

29

Formula

C132H214N44O43S4

Mass

3233.66

PI

6.85

Net Charge

-0

Boman Index

8.74

Hydrophobicity

-0.503

Evidence 1 Activity

Source & Reference

Database Source NA