TPDB

3D PDB MODEL

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TPDB ID TPDB39308

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 30-aa modified toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

YCQKWMWTCDSERKCCEGYVCELWCKYNLZ

FASTA

>TPDB39308|Toxicity|length=30
YCQKWMWTCDSERKCCEGYVCELWCKYNLZ

Formula C161H232N40O45S7

Absent Amino Acids AHIFP

Common Amino Acids C

Mass 3672.27

PI 6.16

Basic Residues 4

Acidic Residues 4

Hydrophobic Residues 10

Net Charge -0

Boman Index 1.26

Hydrophobicity -0.567

Aliphatic Index 35.67

Half Life

Mammalian: 2.8 hour Yeast: 10 min E.coli: 2 min

Extinction Coefficient Cystines 21345

Absorbance 280nm 581.25

Polar Residues 13

number

0

A

1

R

1

N

1

D

6

C

3

E

1

Q

1

G

0

H

0

I

2

L

3

K

1

M

0

F

0

P

1

S

1

T

3

W

3

Y

1

V

Amino Acid Distribution

A: 0 R: 1 N: 1 D: 1 C: 6 E: 3 Q: 1 G: 1 H: 0 I: 0 L: 2 K: 3 M: 1 F: 0 P: 0 S: 1 T: 1 W: 3 Y: 3 V: 1

Length

30

Formula

C161H232N40O45S7

Mass

3672.27

PI

6.16

Net Charge

-0

Boman Index

1.26

Hydrophobicity

-0.567

Evidence 1 Activity

Source & Reference

Database Source NA