TPDB

3D PDB MODEL

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TPDB ID TPDB38862

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 74-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

VLIIAVLFLTACQLTTAVASSRGEQKHRALRSTDKKFKVALLCSPPGSYCFGPAACCSNFCSTLSDVCQESWSG

FASTA

>TPDB38862|Toxicity|length=74
VLIIAVLFLTACQLTTAVASSRGEQKHRALRSTDKKFKVALLCSPPGSYCFGPAACCSNFCSTLSDVCQESWSG

Formula C344H550N94O103S7

Absent Amino Acids M

Common Amino Acids S

Mass 7875.14

PI 8.19

Basic Residues 8

Acidic Residues 4

Hydrophobic Residues 29

Net Charge +3

Boman Index 4.30

Hydrophobicity 0.312

Aliphatic Index 83.11

Half Life

Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 7365

Absorbance 280nm 93.52

Polar Residues 27

number

8

A

3

R

1

N

2

D

7

C

2

E

3

Q

4

G

1

H

2

I

8

L

4

K

0

M

4

F

3

P

10

S

5

T

1

W

1

Y

5

V

Amino Acid Distribution

A: 8 R: 3 N: 1 D: 2 C: 7 E: 2 Q: 3 G: 4 H: 1 I: 2 L: 8 K: 4 M: 0 F: 4 P: 3 S: 10 T: 5 W: 1 Y: 1 V: 5

Length

74

Formula

C344H550N94O103S7

Mass

7875.14

PI

8.19

Net Charge

+3

Boman Index

4.30

Hydrophobicity

0.312

Evidence 1 Activity

Source & Reference

Database Source NA