TPDB

3D PDB MODEL

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TPDB ID TPDB38818

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 71-aa modified toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

VLIIAVLFLTACLLTTAVTSSRGXQKHRALRSTDKNSRMTKRCTAPGGACYAAYTCCSNACNLNTKKCVLS

FASTA

>TPDB38818|Toxicity|length=71
VLIIAVLFLTACLLTTAVTSSRGXQKHRALRSTDKNSRMTKRCTAPGGACYAAYTCCSNACNLNTKKCVLS

Formula C316H537N97O95S8

Absent Amino Acids EW

Common Amino Acids AT

Mass 7471.81

PI 9.83

Basic Residues 11

Acidic Residues 1

Hydrophobic Residues 27

Net Charge +9

Boman Index 4.70

Hydrophobicity 0.168

Aliphatic Index 83.94

Half Life

Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 3355

Absorbance 280nm 44.90

Polar Residues 29

number

9

A

5

R

4

N

1

D

7

C

0

E

1

Q

3

G

1

H

2

I

8

L

5

K

1

M

1

F

1

P

6

S

9

T

0

W

2

Y

4

V

Amino Acid Distribution

A: 9 R: 5 N: 4 D: 1 C: 7 E: 0 Q: 1 G: 3 H: 1 I: 2 L: 8 K: 5 M: 1 F: 1 P: 1 S: 6 T: 9 W: 0 Y: 2 V: 4

Length

71

Formula

C316H537N97O95S8

Mass

7471.81

PI

9.83

Net Charge

+9

Boman Index

4.70

Hydrophobicity

0.168

Evidence 1 Activity

Source & Reference

Database Source NA