TPDB

3D PDB MODEL

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TPDB ID TPDB38417

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 106-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

TEEQKLIEDVNASFRAAMATTANVPPADKYKTLEAAFTVSSKRNLADAVSKAPQLVPKLDEVYNAAYNAADHAAPEDKYEAFVLHFSEALRIIAGTPEVHAVKPGA

FASTA

>TPDB38417|Toxicity|length=106
TEEQKLIEDVNASFRAAMATTANVPPADKYKTLEAAFTVSSKRNLADAVSKAPQLVPKLDEVYNAAYNAADHAAPEDKYEAFVLHFSEALRIIAGTPEVHAVKPGA

Formula C509H798N136O159S1

Absent Amino Acids CW

Common Amino Acids A

Mass 11398.81

PI 5.13

Basic Residues 14

Acidic Residues 15

Hydrophobic Residues 50

Net Charge -4

Boman Index 30.24

Hydrophobicity -0.246

Aliphatic Index 82.17

Half Life

Mammalian: 7.2 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 5960

Absorbance 280nm 52.29

Polar Residues 22

number

22

A

3

R

5

N

6

D

0

C

9

E

2

Q

2

G

3

H

3

I

7

L

8

K

1

M

4

F

7

P

5

S

6

T

0

W

4

Y

9

V

Amino Acid Distribution

A: 22 R: 3 N: 5 D: 6 C: 0 E: 9 Q: 2 G: 2 H: 3 I: 3 L: 7 K: 8 M: 1 F: 4 P: 7 S: 5 T: 6 W: 0 Y: 4 V: 9

Length

106

Formula

C509H798N136O159S1

Mass

11398.81

PI

5.13

Net Charge

-4

Boman Index

30.24

Hydrophobicity

-0.246

Evidence 1 Activity

Source & Reference

Database Source NA