TPDB

3D PDB MODEL

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TPDB ID TPDB38058

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 37-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

SGLPLSVFTIVTQASPDAKNPILEHGDLHAAGFPFDR

FASTA

>TPDB38058|Toxicity|length=37
SGLPLSVFTIVTQASPDAKNPILEHGDLHAAGFPFDR

Formula C178H273N47O53

Absent Amino Acids CMWY

Common Amino Acids ALP

Mass 3919.41

PI 5.16

Basic Residues 4

Acidic Residues 4

Hydrophobic Residues 15

Net Charge -2

Boman Index 6.14

Hydrophobicity 0.027

Aliphatic Index 89.73

Half Life

Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 0

Absorbance 280nm 0.00

Polar Residues 7

number

4

A

1

R

1

N

3

D

0

C

1

E

1

Q

3

G

2

H

2

I

4

L

1

K

0

M

3

F

4

P

3

S

2

T

0

W

0

Y

2

V

Amino Acid Distribution

A: 4 R: 1 N: 1 D: 3 C: 0 E: 1 Q: 1 G: 3 H: 2 I: 2 L: 4 K: 1 M: 0 F: 3 P: 4 S: 3 T: 2 W: 0 Y: 0 V: 2

Length

37

Formula

C178H273N47O53

Mass

3919.41

PI

5.16

Net Charge

-2

Boman Index

6.14

Hydrophobicity

0.027

Evidence 1 Activity

Source & Reference

Database Source NA