TPDB

3D PDB MODEL

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TPDB ID TPDB37936

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 43-aa modified toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

SCIRRGGPCDHRPNDCCYNSSCRCNLWGTNCRCQRMGLFQKWZ

FASTA

>TPDB37936|Toxicity|length=43
SCIRRGGPCDHRPNDCCYNSSCRCNLWGTNCRCQRMGLFQKWZ

Formula C200H311N71O58S9

Absent Amino Acids AEV

Common Amino Acids C

Mass 4926.65

PI 8.53

Basic Residues 8

Acidic Residues 2

Hydrophobic Residues 8

Net Charge +5

Boman Index 4.23

Hydrophobicity -0.844

Aliphatic Index 27.21

Half Life

Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 12990

Absorbance 280nm 263.67

Polar Residues 19

number

0

A

6

R

4

N

2

D

8

C

0

E

2

Q

4

G

1

H

1

I

2

L

1

K

1

M

1

F

2

P

3

S

1

T

2

W

1

Y

0

V

Amino Acid Distribution

A: 0 R: 6 N: 4 D: 2 C: 8 E: 0 Q: 2 G: 4 H: 1 I: 1 L: 2 K: 1 M: 1 F: 1 P: 2 S: 3 T: 1 W: 2 Y: 1 V: 0

Length

43

Formula

C200H311N71O58S9

Mass

4926.65

PI

8.53

Net Charge

+5

Boman Index

4.23

Hydrophobicity

-0.844

Evidence 1 Activity

Source & Reference

Database Source NA