TPDB

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.

TPDB ID TPDB37586

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia ToxinPred 3.0

Sequence_Type

standard

Has_Modification No

Description A 24-aa standard natural toxicity peptide sequence curated from Peptipedia and ToxinPred 3.0, with an available 3D structural model.

Sequence

REIILPALRLQTSSDCLGFPDVWC

FASTA

>TPDB37586|Toxicity|length=24
REIILPALRLQTSSDCLGFPDVWC

Formula C122H194N32O35S2

Absent Amino Acids NHKMY

Common Amino Acids L

Mass 2733.20

PI 4.31

Basic Residues 2

Acidic Residues 3

Hydrophobic Residues 10

Net Charge -1

Boman Index 1.57

Hydrophobicity 0.342

Aliphatic Index 113.75

Half Life

Mammalian: 1 hour Yeast: 2 min E.coli: 2 min

Extinction Coefficient Cystines 5625

Absorbance 280nm 205.80

Polar Residues 6

number

1

A

2

R

0

N

2

D

2

C

1

E

1

Q

1

G

0

H

2

I

4

L

0

K

0

M

1

F

2

P

2

S

1

T

1

W

0

Y

1

V

Amino Acid Distribution

A: 1 R: 2 N: 0 D: 2 C: 2 E: 1 Q: 1 G: 1 H: 0 I: 2 L: 4 K: 0 M: 0 F: 1 P: 2 S: 2 T: 1 W: 1 Y: 0 V: 1

Length

24

Formula

C122H194N32O35S2

Mass

2733.20

PI

4.31

Net Charge

-1

Boman Index

1.57

Hydrophobicity

0.342

Evidence 1 Activity

Source & Reference

Database Source NA