TPDB

3D PDB MODEL

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TPDB ID TPDB37324

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 38-aa modified toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

QTWLVPSTITTCCGYDPGTMCPTCMCDNTCKPKPKKSX

FASTA

>TPDB37324|Toxicity|length=38
QTWLVPSTITTCCGYDPGTMCPTCMCDNTCKPKPKKSX

Formula C169H272N44O54S8

Absent Amino Acids AREHF

Common Amino Acids T

Mass 4040.76

PI 8.02

Basic Residues 4

Acidic Residues 2

Hydrophobic Residues 7

Net Charge +2

Boman Index 5.44

Hydrophobicity -0.416

Aliphatic Index 28.16

Half Life

Mammalian: 0.8 hour Yeast: 10 min E.coli: >10 hour

Extinction Coefficient Cystines 7365

Absorbance 280nm 182.27

Polar Residues 18

number

0

A

0

R

1

N

2

D

6

C

0

E

1

Q

2

G

0

H

1

I

1

L

4

K

2

M

0

F

5

P

2

S

7

T

1

W

1

Y

1

V

Amino Acid Distribution

A: 0 R: 0 N: 1 D: 2 C: 6 E: 0 Q: 1 G: 2 H: 0 I: 1 L: 1 K: 4 M: 2 F: 0 P: 5 S: 2 T: 7 W: 1 Y: 1 V: 1

Length

38

Formula

C169H272N44O54S8

Mass

4040.76

PI

8.02

Net Charge

+2

Boman Index

5.44

Hydrophobicity

-0.416

Evidence 1 Activity

Source & Reference

Database Source NA