TPDB

3D PDB MODEL

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TPDB ID TPDB36905

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 47-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

QLDADQPVERYAEKKQDLNPDESGDFMLPLEGNCCTACRMPPCKCCW

FASTA

>TPDB36905|Toxicity|length=47
QLDADQPVERYAEKKQDLNPDESGDFMLPLEGNCCTACRMPPCKCCW

Formula C224H348N62O74S8

Absent Amino Acids HI

Common Amino Acids C

Mass 5350.08

PI 4.14

Basic Residues 5

Acidic Residues 9

Hydrophobic Residues 13

Net Charge -4

Boman Index 15.44

Hydrophobicity -0.762

Aliphatic Index 45.74

Half Life

Mammalian: 0.8 hour Yeast: 10 min E.coli: >10 hour

Extinction Coefficient Cystines 7365

Absorbance 280nm 137.66

Polar Residues 14

number

3

A

2

R

2

N

5

D

6

C

4

E

3

Q

2

G

0

H

0

I

4

L

3

K

2

M

1

F

5

P

1

S

1

T

1

W

1

Y

1

V

Amino Acid Distribution

A: 3 R: 2 N: 2 D: 5 C: 6 E: 4 Q: 3 G: 2 H: 0 I: 0 L: 4 K: 3 M: 2 F: 1 P: 5 S: 1 T: 1 W: 1 Y: 1 V: 1

Length

47

Formula

C224H348N62O74S8

Mass

5350.08

PI

4.14

Net Charge

-4

Boman Index

15.44

Hydrophobicity

-0.762

Evidence 1 Activity

Source & Reference

Database Source NA