TPDB

3D PDB MODEL

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TPDB ID TPDB36821

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 38-aa modified toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

QKELVPSVITTCCGYDPGTMCPPCRCTNSCPTKPKKPX

FASTA

>TPDB36821|Toxicity|length=38
QKELVPSVITTCCGYDPGTMCPPCRCTNSCPTKPKKPX

Formula C167H276N46O52S7

Absent Amino Acids AHFW

Common Amino Acids P

Mass 3984.73

PI 8.31

Basic Residues 5

Acidic Residues 2

Hydrophobic Residues 6

Net Charge +3

Boman Index 9.81

Hydrophobicity -0.497

Aliphatic Index 35.79

Half Life

Mammalian: 0.8 hour Yeast: 10 min E.coli: >10 hour

Extinction Coefficient Cystines 1865

Absorbance 280nm 46.80

Polar Residues 16

number

0

A

1

R

1

N

1

D

6

C

1

E

1

Q

2

G

0

H

1

I

1

L

4

K

1

M

0

F

7

P

2

S

5

T

0

W

1

Y

2

V

Amino Acid Distribution

A: 0 R: 1 N: 1 D: 1 C: 6 E: 1 Q: 1 G: 2 H: 0 I: 1 L: 1 K: 4 M: 1 F: 0 P: 7 S: 2 T: 5 W: 0 Y: 1 V: 2

Length

38

Formula

C167H276N46O52S7

Mass

3984.73

PI

8.31

Net Charge

+3

Boman Index

9.81

Hydrophobicity

-0.497

Evidence 1 Activity

Source & Reference

Database Source NA