TPDB

3D PDB MODEL

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TPDB ID TPDB36060

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

modified_plain

Has_Modification Yes

Description A 43-aa modified toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

PCETTTCLNGGELRLANNIFEGCLCRCAPGFIGPVCEFTVSRZ

FASTA

>TPDB36060|Toxicity|length=43
PCETTTCLNGGELRLANNIFEGCLCRCAPGFIGPVCEFTVSRZ

Formula C191H304N54O59S6

Absent Amino Acids DQHKMWY

Common Amino Acids C

Mass 4493.20

PI 4.73

Basic Residues 3

Acidic Residues 4

Hydrophobic Residues 13

Net Charge -1

Boman Index 5.97

Hydrophobicity 0.260

Aliphatic Index 72.56

Half Life

Mammalian: >20 hour Yeast: >20 hour E.coli: ?

Extinction Coefficient Cystines 375

Absorbance 280nm 8.35

Polar Residues 14

number

2

A

3

R

3

N

0

D

6

C

4

E

0

Q

5

G

0

H

2

I

4

L

0

K

0

M

3

F

3

P

1

S

4

T

0

W

0

Y

2

V

Amino Acid Distribution

A: 2 R: 3 N: 3 D: 0 C: 6 E: 4 Q: 0 G: 5 H: 0 I: 2 L: 4 K: 0 M: 0 F: 3 P: 3 S: 1 T: 4 W: 0 Y: 0 V: 2

Length

43

Formula

C191H304N54O59S6

Mass

4493.20

PI

4.73

Net Charge

-1

Boman Index

5.97

Hydrophobicity

0.260

Evidence 1 Activity

Source & Reference

Database Source NA