TPDB

3D PDB MODEL

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TPDB ID TPDB35719

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 87-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MTRVFVAMFFLLALTEGWPPLYDHNCENGPNMHYSYTCGTKRKCAIIRKRNGQLTCKLMCKCEPGVDCLHGENIVWDDRTAKIIYCP

FASTA

>TPDB35719|Toxicity|length=87
MTRVFVAMFFLLALTEGWPPLYDHNCENGPNMHYSYTCGTKRKCAIIRKRNGQLTCKLMCKCEPGVDCLHGENIVWDDRTAKIIYCP

Formula C442H688N122O121S12

Absent Amino Acids

Common Amino Acids C

Mass 10031.79

PI 8.09

Basic Residues 14

Acidic Residues 8

Hydrophobic Residues 33

Net Charge +3

Boman Index 12.27

Hydrophobicity -0.205

Aliphatic Index 71.72

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 17460

Absorbance 280nm 174.05

Polar Residues 25

number

4

A

5

R

5

N

4

D

8

C

4

E

1

Q

6

G

3

H

5

I

7

L

6

K

4

M

3

F

5

P

1

S

6

T

2

W

4

Y

4

V

Amino Acid Distribution

A: 4 R: 5 N: 5 D: 4 C: 8 E: 4 Q: 1 G: 6 H: 3 I: 5 L: 7 K: 6 M: 4 F: 3 P: 5 S: 1 T: 6 W: 2 Y: 4 V: 4

Length

87

Formula

C442H688N122O121S12

Mass

10031.79

PI

8.09

Net Charge

+3

Boman Index

12.27

Hydrophobicity

-0.205

Evidence 1 Activity

Source & Reference

Database Source NA