TPDB

3D PDB MODEL

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TPDB ID TPDB35693

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 35-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MTLAELGMAFWHDLAAPVIAGILASMIVNWLNKRK

FASTA

>TPDB35693|Toxicity|length=35
MTLAELGMAFWHDLAAPVIAGILASMIVNWLNKRK

Formula C179H286N46O44S3

Absent Amino Acids CQY

Common Amino Acids A

Mass 3882.70

PI 9.88

Basic Residues 4

Acidic Residues 2

Hydrophobic Residues 22

Net Charge +1

Boman Index -1.55

Hydrophobicity 0.714

Aliphatic Index 122.86

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 11000

Absorbance 280nm 283.31

Polar Residues 4

number

6

A

1

R

2

N

1

D

0

C

1

E

0

Q

2

G

1

H

3

I

5

L

2

K

3

M

1

F

1

P

1

S

1

T

2

W

0

Y

2

V

Amino Acid Distribution

A: 6 R: 1 N: 2 D: 1 C: 0 E: 1 Q: 0 G: 2 H: 1 I: 3 L: 5 K: 2 M: 3 F: 1 P: 1 S: 1 T: 1 W: 2 Y: 0 V: 2

Length

35

Formula

C179H286N46O44S3

Mass

3882.70

PI

9.88

Net Charge

+1

Boman Index

-1.55

Hydrophobicity

0.714

Evidence 1 Activity

Source & Reference

Database Source NA