TPDB

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.

TPDB ID TPDB35661

Activity

Toxicity

Activity_category_statistics

Toxicity and safety peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 60-aa standard natural toxicity peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MTCCNQQSSQPKTTTNCAESSCYKKTWRDFRGTRIERGCGCPQVKPGIKLECCHTNECNN

FASTA

>TPDB35661|Toxicity|length=60
MTCCNQQSSQPKTTTNCAESSCYKKTWRDFRGTRIERGCGCPQVKPGIKLECCHTNECNN

Formula C274H443N89O92S10

Absent Amino Acids

Common Amino Acids C

Mass 6776.67

PI 8.22

Basic Residues 10

Acidic Residues 5

Hydrophobic Residues 9

Net Charge +4

Boman Index 18.18

Hydrophobicity -1.007

Aliphatic Index 26.00

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 7490

Absorbance 280nm 110.53

Polar Residues 30

number

1

A

4

R

5

N

1

D

9

C

4

E

4

Q

4

G

1

H

2

I

1

L

5

K

1

M

1

F

3

P

4

S

7

T

1

W

1

Y

1

V

Amino Acid Distribution

A: 1 R: 4 N: 5 D: 1 C: 9 E: 4 Q: 4 G: 4 H: 1 I: 2 L: 1 K: 5 M: 1 F: 1 P: 3 S: 4 T: 7 W: 1 Y: 1 V: 1

Length

60

Formula

C274H443N89O92S10

Mass

6776.67

PI

8.22

Net Charge

+4

Boman Index

18.18

Hydrophobicity

-1.007

Evidence 1 Activity

Source & Reference

Database Source NA